STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metK-4S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (407 aa)    
Predicted Functional Partners:
ribH
6,7-dimethyl-8-ribityllumazine synthase.
  
 
 0.936
TRDMT1
tRNA (Cytosine38-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.930
mmuM-2
Homocysteine S-methyltransferase.
  
 
 0.907
TAT-13
Tyrosine aminotransferase.
  
 0.907
mmuM-3
Homocysteine S-methyltransferase.
  
 
 0.907
mmuM-4
Homocysteine S-methyltransferase.
  
 
 0.907
mmuM-5
Homocysteine S-methyltransferase.
  
 
 0.907
Saspl_005333
Aminotran_1_2 domain-containing protein.
  
 0.906
ACS-18
1-aminocyclopropane-1-carboxylate synthase.
  
 0.899
ACS-5
1-aminocyclopropane-1-carboxylate synthase.
  
 0.898
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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