STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_044772Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
Saspl_005721
Uncharacterized protein.
   
 
 0.818
BTAF1
TATA-binding protein-associated factor.
    
 
 0.807
Saspl_009328
Uncharacterized protein.
   
 
 0.688
Saspl_017613
Uncharacterized protein.
   
 
 0.688
TIPIN
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.686
TIPIN-2
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.686
RFWD3
E3 ubiquitin-protein ligase RFWD3.
    
   0.674
RFWD3-2
E3 ubiquitin-protein ligase RFWD3.
    
   0.674
Saspl_017477
Uncharacterized protein.
    
 
 0.611
Saspl_014014
Uncharacterized protein.
    
 
 0.611
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.