STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_032291Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
Saspl_014681
Uncharacterized protein.
  
     0.537
Saspl_036592
F-box domain-containing protein.
  
     0.513
Saspl_040809
F-box domain-containing protein.
  
     0.512
Saspl_007195
F-box domain-containing protein.
  
     0.511
Saspl_004129
F-box domain-containing protein.
  
     0.509
Saspl_013123
Uncharacterized protein.
  
     0.482
Saspl_010884
Uncharacterized protein.
  
     0.476
Saspl_034787
Uncharacterized protein.
  
     0.474
Saspl_052885
Uncharacterized protein.
  
     0.460
Saspl_042068
Uncharacterized protein.
  
     0.460
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.