Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DHX16-6 | IMP3-2 | A0A4D8ZYK2 | A0A4D9AQ86 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar ribonucleoprotein IMP3. | 0.969 |
DHX16-6 | IMP3-3 | A0A4D8ZYK2 | A0A4D9BZM0 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar ribonucleoprotein IMP3. | 0.969 |
DHX16-6 | IMP4-2 | A0A4D8ZYK2 | A0A4D9B2R3 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar ribonucleoprotein IMP4. | 0.995 |
DHX16-6 | KRR1 | A0A4D8ZYK2 | A0A4D9B653 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
DHX16-6 | NGDN | A0A4D8ZYK2 | A0A4D8XUV2 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar ribonucleoprotein LCP5. | 0.997 |
DHX16-6 | Saspl_013647 | A0A4D8ZYK2 | A0A4D9C1A2 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | BP28CT domain-containing protein. | 0.997 |
DHX16-6 | UTP14 | A0A4D8ZYK2 | A0A4D8ZIL0 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar RNA-associated protein 14. | 0.999 |
DHX16-6 | UTP14-2 | A0A4D8ZYK2 | A0A4D9ACT5 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar RNA-associated protein 14. | 0.999 |
DHX16-6 | UTP24 | A0A4D8ZYK2 | A0A4D8Z2A9 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar RNA-associated protein 24. | 0.999 |
DHX16-6 | UTP6 | A0A4D8ZYK2 | A0A4D8YVB0 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | U3 small nucleolar RNA-associated protein 6. | 0.997 |
IMP3-2 | DHX16-6 | A0A4D9AQ86 | A0A4D8ZYK2 | U3 small nucleolar ribonucleoprotein IMP3. | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | 0.969 |
IMP3-2 | IMP4-2 | A0A4D9AQ86 | A0A4D9B2R3 | U3 small nucleolar ribonucleoprotein IMP3. | U3 small nucleolar ribonucleoprotein IMP4. | 0.999 |
IMP3-2 | KRR1 | A0A4D9AQ86 | A0A4D9B653 | U3 small nucleolar ribonucleoprotein IMP3. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.998 |
IMP3-2 | NGDN | A0A4D9AQ86 | A0A4D8XUV2 | U3 small nucleolar ribonucleoprotein IMP3. | U3 small nucleolar ribonucleoprotein LCP5. | 0.998 |
IMP3-2 | Saspl_013647 | A0A4D9AQ86 | A0A4D9C1A2 | U3 small nucleolar ribonucleoprotein IMP3. | BP28CT domain-containing protein. | 0.993 |
IMP3-2 | UTP14 | A0A4D9AQ86 | A0A4D8ZIL0 | U3 small nucleolar ribonucleoprotein IMP3. | U3 small nucleolar RNA-associated protein 14. | 0.993 |
IMP3-2 | UTP14-2 | A0A4D9AQ86 | A0A4D9ACT5 | U3 small nucleolar ribonucleoprotein IMP3. | U3 small nucleolar RNA-associated protein 14. | 0.993 |
IMP3-2 | UTP24 | A0A4D9AQ86 | A0A4D8Z2A9 | U3 small nucleolar ribonucleoprotein IMP3. | U3 small nucleolar RNA-associated protein 24. | 0.999 |
IMP3-2 | UTP6 | A0A4D9AQ86 | A0A4D8YVB0 | U3 small nucleolar ribonucleoprotein IMP3. | U3 small nucleolar RNA-associated protein 6. | 0.997 |
IMP3-3 | DHX16-6 | A0A4D9BZM0 | A0A4D8ZYK2 | U3 small nucleolar ribonucleoprotein IMP3. | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. | 0.969 |
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