STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_033542Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
VPS24
Charged multivesicular body protein 3.
   
 0.921
VPS24-2
Charged multivesicular body protein 3.
   
 0.921
VPS24-3
Charged multivesicular body protein 3.
   
 0.921
VPS4
Vacuolar protein-sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.879
VPS4-2
Vacuolar protein-sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.879
Saspl_004015
Uncharacterized protein; Belongs to the peptidase S8 family.
    
 0.879
VPS4-3
Vacuolar protein-sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.879
Saspl_007085
Uncharacterized protein; Belongs to the peptidase S8 family.
    
 0.879
VPS36
ESCRT-II complex subunit VPS36.
    
 0.860
CHMP1
Charged multivesicular body protein 1.
   
 0.856
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.