STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_041373DTW domain-containing protein. (382 aa)    
Predicted Functional Partners:
Saspl_046027
Uncharacterized protein.
  
     0.525
Saspl_021746
Uncharacterized protein.
  
     0.519
Saspl_036288
Uncharacterized protein.
  
     0.513
Saspl_020426
Uncharacterized protein.
  
     0.513
Saspl_016541
Ig-like domain-containing protein.
  
     0.512
Saspl_046726
Uncharacterized protein.
  
     0.507
Saspl_032580
Uncharacterized protein.
  
     0.499
Saspl_028082
TLC domain-containing protein.
  
     0.476
Saspl_024263
TLC domain-containing protein.
  
     0.475
Saspl_005211
DTW domain-containing protein.
      
 0.472
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.