STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYF1-2Pre-mRNA-splicing factor SYF1. (513 aa)    
Predicted Functional Partners:
SYF2
Pre-mRNA-splicing factor SYF2.
    
 0.993
SYF2-2
Pre-mRNA-splicing factor SYF2.
    
 0.993
AQR
Intron-binding protein aquarius.
   
 0.984
AQR-2
Intron-binding protein aquarius.
   
 0.984
PRPF19
Pre-mRNA-processing factor 19.
   
 0.979
PRPF19-2
Pre-mRNA-processing factor 19.
   
 0.979
PRPF19-3
Pre-mRNA-processing factor 19.
   
 0.979
ISY1
Pre-mRNA-splicing factor ISY1.
    
 0.978
ISY1-2
Pre-mRNA-splicing factor ISY1.
    
 0.978
ISY1-3
Pre-mRNA-splicing factor ISY1.
    
 0.978
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.