STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_027014Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
ADCK-6
AarF domain-containing kinase.
      
 0.495
Saspl_015512
PMR5N domain-containing protein.
  
     0.476
ADCK-14
AarF domain-containing kinase.
      
 0.473
Saspl_010053
Uncharacterized protein.
  
     0.468
Saspl_027005
Uncharacterized protein.
  
     0.463
ADCK-16
AarF domain-containing kinase.
      
 0.455
ADCK-18
AarF domain-containing kinase.
      
 0.455
Saspl_047762
Uncharacterized protein.
  
     0.451
Saspl_021622
J domain-containing protein.
  
     0.437
copB-5
Cu2+-exporting ATPase.
  
     0.428
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.