STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_026816Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
Saspl_020916
Uncharacterized protein.
  
   
 0.651
Saspl_021807
Uncharacterized protein.
  
   
 0.647
Saspl_014169
Uncharacterized protein.
  
   
 0.531
Saspl_012612
Uncharacterized protein.
  
   
 0.525
Saspl_017313
Uncharacterized protein.
  
   
 0.524
Saspl_010621
Uncharacterized protein.
  
   
 0.523
Saspl_000966
Uncharacterized protein.
  
   
 0.516
Saspl_038710
Uncharacterized protein.
  
     0.515
Saspl_036319
Uncharacterized protein.
  
     0.511
Saspl_040136
Uncharacterized protein.
  
     0.508
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.