STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGD1-4Nascent polypeptide-associated complex subunit beta. (160 aa)    
Predicted Functional Partners:
RP-L5e-3
Large subunit ribosomal protein L5e.
   
 
 0.959
RP-L31e
Large subunit ribosomal protein L31e.
   
 
 0.936
RP-L31e-2
Large subunit ribosomal protein L31e.
   
 
 0.936
RP-L31e-3
Large subunit ribosomal protein L31e.
   
 
 0.936
RP-L31e-4
Large subunit ribosomal protein L31e.
   
 
 0.936
EGD2
Nascent polypeptide-associated complex subunit alpha.
   
 
 0.923
EGD2-2
Nascent polypeptide-associated complex subunit alpha.
   
 
 0.923
EGD2-3
Nascent polypeptide-associated complex subunit alpha.
   
 
 0.923
EGD2-4
Nascent polypeptide-associated complex subunit alpha.
   
 
 0.923
EGD2-5
Nascent polypeptide-associated complex subunit alpha.
   
 
 0.923
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.