STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_003838Uncharacterized protein. (435 aa)    
Predicted Functional Partners:
Saspl_024791
Uncharacterized protein.
  
     0.503
Saspl_012701
Uncharacterized protein.
  
     0.502
Saspl_053542
Uncharacterized protein.
  
     0.500
Saspl_038955
Uncharacterized protein.
  
     0.500
Saspl_053738
Uncharacterized protein.
  
     0.498
Saspl_051476
Uncharacterized protein.
  
     0.496
Saspl_051478
Uncharacterized protein.
  
     0.493
Saspl_049958
Uncharacterized protein.
  
     0.490
Saspl_026197
Uncharacterized protein.
  
     0.490
Saspl_050196
Uncharacterized protein.
  
     0.483
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.