STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_026242Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
Saspl_050326
Uncharacterized protein.
  
     0.536
Saspl_047915
Uncharacterized protein.
  
     0.533
Saspl_005752
Uncharacterized protein.
  
 
   0.526
Saspl_025274
Uncharacterized protein.
  
 
   0.518
Saspl_013721
Uncharacterized protein.
  
 
   0.517
Saspl_036786
Uncharacterized protein.
  
 
   0.512
Saspl_025997
Uncharacterized protein.
  
     0.510
Saspl_048713
Uncharacterized protein.
  
 
   0.503
Saspl_035993
Uncharacterized protein.
  
     0.503
Saspl_022019
Uncharacterized protein.
  
     0.498
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.