Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PHF5A | SERK1-13 | A0A4D8ZCZ5 | A0A4D9A231 | PHD finger-like domain-containing protein 5A. | Somatic embryogenesis receptor kinase 1. | 0.496 |
PHF5A | SNRPD2 | A0A4D8ZCZ5 | A0A4D8YK25 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
PHF5A | SNRPD2-2 | A0A4D8ZCZ5 | A0A4D8YLR2 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
PHF5A | SNRPE | A0A4D8ZCZ5 | A0A4D9AXT0 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PHF5A | SNRPF | A0A4D8ZCZ5 | A0A4D8Z5S9 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein F. | 0.998 |
PHF5A | Saspl_008478 | A0A4D8ZCZ5 | A0A4D9B1F9 | PHD finger-like domain-containing protein 5A. | Uncharacterized protein. | 0.496 |
PHF5A | Saspl_017888 | A0A4D8ZCZ5 | A0A4D9B060 | PHD finger-like domain-containing protein 5A. | Uncharacterized protein. | 0.998 |
PHF5A-2 | SERK1-13 | A0A4D9BBC2 | A0A4D9A231 | PHD finger-like domain-containing protein 5A. | Somatic embryogenesis receptor kinase 1. | 0.496 |
PHF5A-2 | SNRPD2 | A0A4D9BBC2 | A0A4D8YK25 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
PHF5A-2 | SNRPD2-2 | A0A4D9BBC2 | A0A4D8YLR2 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein Sm D2. | 0.995 |
PHF5A-2 | SNRPE | A0A4D9BBC2 | A0A4D9AXT0 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PHF5A-2 | SNRPF | A0A4D9BBC2 | A0A4D8Z5S9 | PHD finger-like domain-containing protein 5A. | Small nuclear ribonucleoprotein F. | 0.998 |
PHF5A-2 | Saspl_008478 | A0A4D9BBC2 | A0A4D9B1F9 | PHD finger-like domain-containing protein 5A. | Uncharacterized protein. | 0.496 |
PHF5A-2 | Saspl_017888 | A0A4D9BBC2 | A0A4D9B060 | PHD finger-like domain-containing protein 5A. | Uncharacterized protein. | 0.998 |
SERK1-13 | PHF5A | A0A4D9A231 | A0A4D8ZCZ5 | Somatic embryogenesis receptor kinase 1. | PHD finger-like domain-containing protein 5A. | 0.496 |
SERK1-13 | PHF5A-2 | A0A4D9A231 | A0A4D9BBC2 | Somatic embryogenesis receptor kinase 1. | PHD finger-like domain-containing protein 5A. | 0.496 |
SERK1-13 | SERK4-29 | A0A4D9A231 | A0A4D9BXZ6 | Somatic embryogenesis receptor kinase 1. | Somatic embryogenesis receptor kinase 4. | 0.514 |
SERK1-13 | SNRPD2 | A0A4D9A231 | A0A4D8YK25 | Somatic embryogenesis receptor kinase 1. | Small nuclear ribonucleoprotein Sm D2. | 0.478 |
SERK1-13 | SNRPD2-2 | A0A4D9A231 | A0A4D8YLR2 | Somatic embryogenesis receptor kinase 1. | Small nuclear ribonucleoprotein Sm D2. | 0.478 |
SERK1-13 | SNRPE | A0A4D9A231 | A0A4D9AXT0 | Somatic embryogenesis receptor kinase 1. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.523 |
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