STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4CL-144-coumarate--CoA ligase. (473 aa)    
Predicted Functional Partners:
copA-4
Cu+-exporting ATPase.
   
 0.959
CCR
Cinnamoyl-CoA reductase.
  
 0.920
CCR-6
Cinnamoyl-CoA reductase.
  
 0.920
Saspl_047159
Uncharacterized protein.
    
 0.919
Saspl_018515
Uncharacterized protein.
    
 0.919
CSE
Caffeoylshikimate esterase.
  
 
 0.913
CSE-2
Caffeoylshikimate esterase.
  
 
 0.913
Saspl_021689
Hydrolase_4 domain-containing protein.
    
 0.913
Saspl_011985
Hydrolase_4 domain-containing protein.
    
 0.913
Saspl_048950
Hydrolase_4 domain-containing protein.
    
 0.909
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.