STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_031519Uncharacterized protein. (530 aa)    
Predicted Functional Partners:
SERK4-29
Somatic embryogenesis receptor kinase 4.
  
 
0.599
tuf-5
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
     
 0.595
tuf-7
Elongation factor Tu.
     
 0.595
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.523
BAK1
Brassinosteroid insensitive 1-associated receptor kinase 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.522
BAK1-2
Brassinosteroid insensitive 1-associated receptor kinase 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.522
Saspl_032071
Uncharacterized protein.
    
 0.522
BAK1-3
Brassinosteroid insensitive 1-associated receptor kinase 1.
    
 0.522
SERK4-12
Somatic embryogenesis receptor kinase 4.
    
 0.522
SERK4-15
Somatic embryogenesis receptor kinase 4; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
0.522
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.