STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP7-5Vesicle-associated membrane protein 7. (168 aa)    
Predicted Functional Partners:
VAMP7
Vesicle-associated membrane protein 7.
  
  
 
0.870
VAMP7-6
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
  
  
 
0.867
VAMP7-7
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
  
  
 
0.867
Saspl_035934
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.805
VTI1-5
Vesicle transport through interaction with t-SNAREs 1.
   
 0.674
VTI1-10
Vesicle transport through interaction with t-SNAREs 1.
   
 0.674
SNAP29
Synaptosomal-associated protein 29.
    
 0.643
SNAP29-2
Synaptosomal-associated protein 29.
    
 0.643
SNAP29-3
Synaptosomal-associated protein 29.
    
 0.643
SNAP29-4
Synaptosomal-associated protein 29.
    
 0.643
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.