pel-30 protein (Salvia splendens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

pel-30

Pectate lyase. (203 aa)

Predicted Functional Partners:

Saspl_047398

0.933

Saspl_004309

0.932

Saspl_045965

0.930

Saspl_043845

0.927

Saspl_047930

0.927

Saspl_035568

0.927

Saspl_051716

0.926

Saspl_047058

0.926

Saspl_045504

0.926

Saspl_030690

0.926

Your Current Organism:

Salvia splendens

NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Saspl_004309	Saspl_030690	A0A4D9AAN0	A0A4D8Z1Z4	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.843
Saspl_004309	Saspl_045504	A0A4D9AAN0	A0A4D8YRG3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.850
Saspl_004309	Saspl_047058	A0A4D9AAN0	A0A4D8YCG5	Uncharacterized protein.	Uncharacterized protein.	0.839
Saspl_004309	Saspl_051716	A0A4D9AAN0	A0A4D8YA56	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.844
Saspl_004309	pel-30	A0A4D9AAN0	A0A4D9AE91	Uncharacterized protein.	Pectate lyase.	0.932
Saspl_030690	Saspl_004309	A0A4D8Z1Z4	A0A4D9AAN0	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.843
Saspl_030690	Saspl_043845	A0A4D8Z1Z4	A0A4D8YGV9	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.847
Saspl_030690	Saspl_047398	A0A4D8Z1Z4	A0A4D8YEC0	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.882
Saspl_030690	Saspl_047930	A0A4D8Z1Z4	A0A4D8YY21	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.853
Saspl_030690	pel-30	A0A4D8Z1Z4	A0A4D9AE91	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Pectate lyase.	0.926
Saspl_035568	Saspl_045965	A0A4D9AYW2	A0A4D8YSF2	Pectate_lyase_3 domain-containing protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.902
Saspl_035568	pel-30	A0A4D9AYW2	A0A4D9AE91	Pectate_lyase_3 domain-containing protein; Belongs to the glycosyl hydrolase 28 family.	Pectate lyase.	0.927
Saspl_043845	Saspl_030690	A0A4D8YGV9	A0A4D8Z1Z4	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.847
Saspl_043845	Saspl_045504	A0A4D8YGV9	A0A4D8YRG3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.854
Saspl_043845	Saspl_047058	A0A4D8YGV9	A0A4D8YCG5	Uncharacterized protein.	Uncharacterized protein.	0.853
Saspl_043845	Saspl_051716	A0A4D8YGV9	A0A4D8YA56	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	0.852
Saspl_043845	pel-30	A0A4D8YGV9	A0A4D9AE91	Uncharacterized protein.	Pectate lyase.	0.927
Saspl_045504	Saspl_004309	A0A4D8YRG3	A0A4D9AAN0	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.850
Saspl_045504	Saspl_043845	A0A4D8YRG3	A0A4D8YGV9	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.854
Saspl_045504	Saspl_047398	A0A4D8YRG3	A0A4D8YEC0	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.889