STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_017617Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
clpS
ATP-dependent Clp protease adaptor protein ClpS.
  
  
 0.579
Saspl_053233
Uncharacterized protein.
  
   
 0.567
Saspl_035900
Uncharacterized protein.
  
     0.525
Saspl_040970
Uncharacterized protein.
  
   
 0.501
clpS-2
ATP-dependent Clp protease adaptor protein ClpS.
   
  
 0.490
Saspl_011305
Thioredoxin domain-containing protein.
      
 0.483
Saspl_006240
Uncharacterized protein.
      
 0.482
Saspl_009344
Uncharacterized protein.
   
  
 0.478
Saspl_017597
Uncharacterized protein.
   
  
 0.478
ndhN
NAD(P)H-quinone oxidoreductase subunit N.
  
     0.470
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.