STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD4-6Bromodomain-containing protein 4. (439 aa)    
Predicted Functional Partners:
TAF7
Transcription initiation factor TFIID subunit 7.
    
 
 0.710
TAF7-3
Transcription initiation factor TFIID subunit 7.
    
 
 0.710
SMARCA2_4-8
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
    
 
 0.684
SMARCA2_4-10
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
    
 
 0.684
TAF1
Transcription initiation factor TFIID subunit 1.
    
 
 0.597
CENPA
Histone H3-like centromeric protein A.
  
 
 
 0.563
CENPA-2
Histone H3-like centromeric protein A.
  
 
 
 0.558
ACTF-12
Actin, other eukaryote.
  
 
 
 0.524
ACTF-13
Actin, other eukaryote.
  
 
 
 0.522
ACTF
Actin, other eukaryote.
  
 
 
 0.519
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.