STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_001847Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
Saspl_049982
Uncharacterized protein.
  
     0.533
Saspl_031820
Uncharacterized protein.
  
     0.527
MYBP-131
Myb proto-oncogene protein, plant.
  
     0.526
Saspl_049688
Uncharacterized protein.
  
     0.522
Saspl_024293
Uncharacterized protein.
  
     0.522
Saspl_051101
Uncharacterized protein.
  
     0.521
Saspl_044531
Tify domain-containing protein.
  
     0.517
Saspl_001047
Tify domain-containing protein.
  
     0.511
Saspl_050355
Uncharacterized protein.
  
     0.511
Saspl_049025
Uncharacterized protein.
  
     0.510
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.