STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhNNAD(P)H-quinone oxidoreductase subunit N. (336 aa)    
Predicted Functional Partners:
Saspl_045116
Uncharacterized protein.
  
 
 0.984
Saspl_045052
Uncharacterized protein.
  
 
 0.984
LHCA2-6
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
   0.979
Saspl_011613
Uncharacterized protein.
   
 
 0.974
Saspl_053542
Uncharacterized protein.
   
 
 0.972
Saspl_053738
Uncharacterized protein.
   
 
 0.972
Saspl_026197
Uncharacterized protein.
   
 
 0.972
Saspl_015807
Uncharacterized protein.
   
 
 0.971
Saspl_006241
Uncharacterized protein.
   
 
 0.971
psbQ-4
Photosystem II oxygen-evolving enhancer protein 3.
   
 
 0.967
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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