Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saspl_008299 | aroA | A0A4D9B1L4 | A0A4D8Y0K7 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.692 |
Saspl_008299 | aroA-2 | A0A4D9B1L4 | A0A4D8ZGC2 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.692 |
Saspl_008299 | aroA-3 | A0A4D9B1L4 | A0A4D8ZUB6 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.692 |
Saspl_008299 | aroB | A0A4D9B1L4 | A0A4D8YRW5 | Uncharacterized protein. | 3-dehydroquinate synthase. | 0.692 |
Saspl_008299 | aroB-2 | A0A4D9B1L4 | A0A4D8ZQU0 | Uncharacterized protein. | 3-dehydroquinate synthase. | 0.692 |
Saspl_008299 | aroDE | A0A4D9B1L4 | A0A4D8Y0L1 | Uncharacterized protein. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.692 |
Saspl_008299 | aroDE-2 | A0A4D9B1L4 | A0A4D8Z255 | Uncharacterized protein. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.692 |
Saspl_008299 | aroDE-3 | A0A4D9B1L4 | A0A4D8ZXU6 | Uncharacterized protein. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.692 |
Saspl_008299 | aroDE-4 | A0A4D9B1L4 | A0A4D9A7F7 | Uncharacterized protein. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.692 |
Saspl_008299 | ygbJ | A0A4D9B1L4 | A0A4D8ZJ47 | Uncharacterized protein. | Putative dehydrogenase. | 0.850 |
aroA | Saspl_008299 | A0A4D8Y0K7 | A0A4D9B1L4 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Uncharacterized protein. | 0.692 |
aroA | aroDE-2 | A0A4D8Y0K7 | A0A4D8Z255 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.539 |
aroA | aroDE-3 | A0A4D8Y0K7 | A0A4D8ZXU6 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.539 |
aroA | ygbJ | A0A4D8Y0K7 | A0A4D8ZJ47 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Putative dehydrogenase. | 0.469 |
aroA-2 | Saspl_008299 | A0A4D8ZGC2 | A0A4D9B1L4 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Uncharacterized protein. | 0.692 |
aroA-2 | aroDE-2 | A0A4D8ZGC2 | A0A4D8Z255 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.540 |
aroA-2 | aroDE-3 | A0A4D8ZGC2 | A0A4D8ZXU6 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.539 |
aroA-2 | ygbJ | A0A4D8ZGC2 | A0A4D8ZJ47 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Putative dehydrogenase. | 0.469 |
aroA-3 | Saspl_008299 | A0A4D8ZUB6 | A0A4D9B1L4 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Uncharacterized protein. | 0.692 |
aroA-3 | aroDE-2 | A0A4D8ZUB6 | A0A4D8Z255 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 3-dehydroquinate dehydratase / shikimate dehydrogenase. | 0.540 |
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