STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_017367Tr-type G domain-containing protein. (843 aa)    
Predicted Functional Partners:
RP-L5e-3
Large subunit ribosomal protein L5e.
  
 0.995
RP-S28e
Small subunit ribosomal protein S28e.
  
 0.994
DPH6
Diphthine-ammonia ligase.
   
 0.992
RP-L25-4
Large subunit ribosomal protein L25.
  
 
 0.989
RP-L5e-2
Large subunit ribosomal protein L5e.
  
 0.985
RP-L31
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.982
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.982
RP-L36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.981
RP-S29e
Small subunit ribosomal protein S29e.
  
 0.981
RP-L36-2
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.981
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.