STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_014043Uncharacterized protein. (654 aa)    
Predicted Functional Partners:
Saspl_046993
Uncharacterized protein.
  
 
   0.548
Saspl_050144
Uncharacterized protein.
  
 
   0.544
Saspl_004291
Uncharacterized protein.
  
  0.544
Saspl_004785
Uncharacterized protein.
  
   
 0.535
Saspl_008115
NAB domain-containing protein.
  
 
   0.528
Saspl_032179
Uncharacterized protein.
  
   
 0.525
K06990-2
Uncharacterized protein.
   
  0.522
Saspl_036520
NAB domain-containing protein.
  
 
   0.521
Saspl_043945
Peptidase C50 domain-containing protein.
    
 0.517
Saspl_034824
Peptidase C50 domain-containing protein.
    
 0.517
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.