STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CML-61Calcium-binding protein CML. (258 aa)    
Predicted Functional Partners:
Saspl_048443
Uncharacterized protein.
    
 0.767
Saspl_039564
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.767
Saspl_017532
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.767
KIFC2_3-9
Kinesin family member C2/C3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.767
Saspl_009417
Uncharacterized protein.
    
 0.744
TPC1
Two pore calcium channel protein, plant.
    
 0.687
TPC1-2
Two pore calcium channel protein, plant.
    
 0.687
XPC
Xeroderma pigmentosum group C-complementing protein.
    
 0.665
XPC-2
Xeroderma pigmentosum group C-complementing protein.
    
 0.665
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase.
     
 0.589
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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