STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_026124HTH myb-type domain-containing protein. (622 aa)    
Predicted Functional Partners:
Saspl_034018
Telo_bind domain-containing protein.
    
 0.591
Saspl_035405
Uncharacterized protein.
    
 0.591
NBN
Nijmegen breakage syndrome protein 1.
    
  0.466
NBN-2
Nijmegen breakage syndrome protein 1.
    
  0.466
Saspl_039273
3'-5' exonuclease domain-containing protein.
    
  0.452
recQ
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
  0.452
recQ-3
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
  0.452
RAD50
DNA repair protein RAD50.
    
 0.425
RAD50-2
DNA repair protein RAD50.
    
 0.425
RAD50-3
DNA repair protein RAD50.
    
 0.425
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.