STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPM1-16Disease resistance protein RPM1; Belongs to the disease resistance NB-LRR family. (1104 aa)    
Predicted Functional Partners:
AURKX
Aurora kinase, other; Belongs to the protein kinase superfamily.
   
  0.491
AURKX-2
Aurora kinase, other; Belongs to the protein kinase superfamily.
   
  0.491
AURKX-3
Aurora kinase, other; Belongs to the protein kinase superfamily.
   
  0.491
AURKX-4
Aurora kinase, other; Belongs to the protein kinase superfamily.
   
  0.491
AURKX-5
Aurora kinase, other; Belongs to the protein kinase superfamily.
   
  0.491
AURKX-6
Aurora kinase, other.
   
  0.491
AURKX-7
Aurora kinase, other; Belongs to the protein kinase superfamily.
   
  0.491
AURKX-8
Aurora kinase, other; Belongs to the protein kinase superfamily.
   
  0.491
CYC
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.444
CYC-2
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.444
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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