STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFA1-20Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (905 aa)    
Predicted Functional Partners:
Saspl_039273
3'-5' exonuclease domain-containing protein.
    
 0.977
recQ
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.977
recQ-3
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.977
Saspl_038825
Uncharacterized protein.
   
 0.974
RFA2
Replication factor A2.
   
 0.974
Saspl_018777
RPA_C domain-containing protein.
   
 0.974
RFA2-2
Replication factor A2.
   
 0.974
RFA2-3
Replication factor A2.
   
 0.974
DNA2
DNA replication ATP-dependent helicase Dna2.
    
 0.927
DNA2-2
DNA replication ATP-dependent helicase Dna2.
    
 0.927
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.