STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HD-ZIP-114Homeobox-leucine zipper protein. (725 aa)    
Predicted Functional Partners:
NUP88
Nuclear pore complex protein Nup88.
     
 0.607
Saspl_048937
PEROXIDASE_4 domain-containing protein.
  
 
   0.534
Saspl_029945
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
   0.530
Saspl_029157
Uncharacterized protein.
  
     0.507
Saspl_020861
Uncharacterized protein.
  
 
   0.505
Saspl_027491
PEROXIDASE_4 domain-containing protein.
  
 
   0.503
AUX1-10
Auxin influx carrier (AUX1 LAX family).
  
     0.502
Saspl_053529
Uncharacterized protein.
  
 
   0.499
Saspl_037092
Uncharacterized protein.
  
 
   0.499
Saspl_013415
Uncharacterized protein.
  
 
   0.499
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.