Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PRDX6 | Saspl_002592 | A0A4D8YQ42 | A0A4D9C422 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.918 |
PRDX6 | Saspl_005596 | A0A4D8YQ42 | A0A4D8XZJ2 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Uncharacterized protein. | 0.528 |
PRDX6 | Saspl_010792 | A0A4D8YQ42 | A0A4D9BN46 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Uncharacterized protein. | 0.451 |
PRDX6 | Saspl_016818 | A0A4D8YQ42 | A0A4D9BHT9 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Uncharacterized protein. | 0.474 |
PRDX6 | Saspl_019518 | A0A4D8YQ42 | A0A4D9A696 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Trehalase. | 0.474 |
PRDX6 | Saspl_020120 | A0A4D8YQ42 | A0A4D9B146 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.918 |
PRDX6 | Saspl_026825 | A0A4D8YQ42 | A0A4D8Z054 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.918 |
PRDX6 | katE | A0A4D8YQ42 | A0A4D8XUV1 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.918 |
PRDX6 | katE-2 | A0A4D8YQ42 | A0A4D9A4C7 | Peroxiredoxin 6, 1-Cys peroxiredoxin. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.918 |
Saspl_002592 | PRDX6 | A0A4D9C422 | A0A4D8YQ42 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Peroxiredoxin 6, 1-Cys peroxiredoxin. | 0.918 |
Saspl_002592 | Saspl_010792 | A0A4D9C422 | A0A4D9BN46 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Uncharacterized protein. | 0.454 |
Saspl_002592 | Saspl_016818 | A0A4D9C422 | A0A4D9BHT9 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Uncharacterized protein. | 0.907 |
Saspl_002592 | Saspl_019518 | A0A4D9C422 | A0A4D9A696 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Trehalase. | 0.907 |
Saspl_002592 | Saspl_020120 | A0A4D9C422 | A0A4D9B146 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.872 |
Saspl_002592 | Saspl_026825 | A0A4D9C422 | A0A4D8Z054 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.872 |
Saspl_002592 | katE | A0A4D9C422 | A0A4D8XUV1 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.871 |
Saspl_002592 | katE-2 | A0A4D9C422 | A0A4D9A4C7 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.872 |
Saspl_005596 | PRDX6 | A0A4D8XZJ2 | A0A4D8YQ42 | Uncharacterized protein. | Peroxiredoxin 6, 1-Cys peroxiredoxin. | 0.528 |
Saspl_005596 | Saspl_010792 | A0A4D8XZJ2 | A0A4D9BN46 | Uncharacterized protein. | Uncharacterized protein. | 0.419 |
Saspl_006339 | Saspl_010792 | A0A4D9BJI7 | A0A4D9BN46 | Uncharacterized protein. | Uncharacterized protein. | 0.537 |
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