STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_007664Uncharacterized protein. (1089 aa)    
Predicted Functional Partners:
Saspl_020874
LAGLIDADG_2 domain-containing protein.
  
 
 
 0.674
Saspl_013400
LAGLIDADG_2 domain-containing protein.
  
 
 
 0.672
Saspl_026178
Uncharacterized protein.
  
   
 0.671
DCP2
mRNA-decapping enzyme subunit 2.
     
 0.591
DCP2-2
mRNA-decapping enzyme subunit 2.
     
 0.591
DCP2-3
mRNA-decapping enzyme subunit 2.
     
 0.591
DCP2-4
mRNA-decapping enzyme subunit 2.
     
 0.591
Saspl_046903
Uncharacterized protein.
  
  
  0.533
Saspl_009074
Uncharacterized protein.
  
  
  0.525
MTERFD-5
mTERF domain-containing protein, mitochondrial.
  
   
 0.516
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.