STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saspl_029621Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (328 aa)    
Predicted Functional Partners:
GPI-2
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.896
GPI-3
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.896
ALDO-9
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
     
 0.875
ygbJ
Putative dehydrogenase.
   
 
  0.872
Saspl_022325
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family.
  
  
 
0.870
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.869
GPI-4
Glucose-6-phosphate isomerase.
  
 
 0.869
GPI-5
Glucose-6-phosphate isomerase.
  
 
 0.869
HK-11
Phosphotransferase.
     
 0.865
HK-12
Phosphotransferase.
     
 0.865
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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