STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PABPC-24Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (664 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap-binding protein subunit 1.
    
 0.847
ERF3
Peptide chain release factor subunit 3.
   
 0.773
ERF3-2
Peptide chain release factor subunit 3.
   
 0.773
NCBP2
Nuclear cap-binding protein subunit 2.
   
0.738
NCBP2-2
Nuclear cap-binding protein subunit 2.
   
0.738
NCBP2-3
Nuclear cap-binding protein subunit 2.
   
 0.738
NCBP2-4
Nuclear cap-binding protein subunit 2.
   
 0.738
UPF1
Regulator of nonsense transcripts 1.
    
 0.729
UPF1-2
Regulator of nonsense transcripts 1.
    
 0.729
UPF1-3
Regulator of nonsense transcripts 1.
    
 0.729
Your Current Organism:
Salvia splendens
NCBI taxonomy Id: 180675
Other names: S. splendens, Salvia splendens Ker Gawl., bonfire salvia, scarlet sage
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.