Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC73 | CTR9 | A0A4D8Y0X1 | A0A4D8Y2C5 | Parafibromin. | RNA polymerase-associated protein CTR9. | 0.992 |
CDC73 | CTR9-2 | A0A4D8Y0X1 | A0A4D9A717 | Parafibromin. | RNA polymerase-associated protein CTR9. | 0.992 |
CDC73 | Saspl_007344 | A0A4D8Y0X1 | A0A4D9BZJ4 | Parafibromin. | WD_REPEATS_REGION domain-containing protein. | 0.749 |
CDC73-2 | CTR9 | A0A4D8Z7F4 | A0A4D8Y2C5 | Parafibromin. | RNA polymerase-associated protein CTR9. | 0.992 |
CDC73-2 | CTR9-2 | A0A4D8Z7F4 | A0A4D9A717 | Parafibromin. | RNA polymerase-associated protein CTR9. | 0.992 |
CDC73-2 | Saspl_007344 | A0A4D8Z7F4 | A0A4D9BZJ4 | Parafibromin. | WD_REPEATS_REGION domain-containing protein. | 0.749 |
CTR9 | CDC73 | A0A4D8Y2C5 | A0A4D8Y0X1 | RNA polymerase-associated protein CTR9. | Parafibromin. | 0.992 |
CTR9 | CDC73-2 | A0A4D8Y2C5 | A0A4D8Z7F4 | RNA polymerase-associated protein CTR9. | Parafibromin. | 0.992 |
CTR9 | Saspl_007344 | A0A4D8Y2C5 | A0A4D9BZJ4 | RNA polymerase-associated protein CTR9. | WD_REPEATS_REGION domain-containing protein. | 0.738 |
CTR9-2 | CDC73 | A0A4D9A717 | A0A4D8Y0X1 | RNA polymerase-associated protein CTR9. | Parafibromin. | 0.992 |
CTR9-2 | CDC73-2 | A0A4D9A717 | A0A4D8Z7F4 | RNA polymerase-associated protein CTR9. | Parafibromin. | 0.992 |
CTR9-2 | Saspl_007344 | A0A4D9A717 | A0A4D9BZJ4 | RNA polymerase-associated protein CTR9. | WD_REPEATS_REGION domain-containing protein. | 0.738 |
MTR4-6 | SKI3 | A0A4D9ASQ4 | A0A4D8XVJ1 | ATP-dependent RNA helicase DOB1. | Superkiller protein 3. | 0.990 |
MTR4-6 | SKI3-2 | A0A4D9ASQ4 | A0A4D9AM78 | ATP-dependent RNA helicase DOB1. | Superkiller protein 3. | 0.990 |
MTR4-6 | SKI3-3 | A0A4D9ASQ4 | A0A4D9B5P4 | ATP-dependent RNA helicase DOB1. | Superkiller protein 3. | 0.990 |
MTR4-6 | Saspl_007344 | A0A4D9ASQ4 | A0A4D9BZJ4 | ATP-dependent RNA helicase DOB1. | WD_REPEATS_REGION domain-containing protein. | 0.755 |
MTR4-9 | SKI3 | A0A4D9C4J4 | A0A4D8XVJ1 | ATP-dependent RNA helicase DOB1. | Superkiller protein 3. | 0.990 |
MTR4-9 | SKI3-2 | A0A4D9C4J4 | A0A4D9AM78 | ATP-dependent RNA helicase DOB1. | Superkiller protein 3. | 0.990 |
MTR4-9 | SKI3-3 | A0A4D9C4J4 | A0A4D9B5P4 | ATP-dependent RNA helicase DOB1. | Superkiller protein 3. | 0.990 |
MTR4-9 | Saspl_007344 | A0A4D9C4J4 | A0A4D9BZJ4 | ATP-dependent RNA helicase DOB1. | WD_REPEATS_REGION domain-containing protein. | 0.755 |
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