Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SRX1 | Saspl_022468 | A0A4D9B8S3 | A0A4D9C7X0 | Sulfiredoxin. | Thioredoxin domain-containing protein. | 0.949 |
SRX1 | trxB | A0A4D9B8S3 | A0A4D8XXV6 | Sulfiredoxin. | Thioredoxin reductase (NADPH). | 0.483 |
SRX1 | trxB-2 | A0A4D9B8S3 | A0A4D8ZWF3 | Sulfiredoxin. | Thioredoxin reductase (NADPH). | 0.483 |
SRX1 | trxB-3 | A0A4D9B8S3 | A0A4D9AEW7 | Sulfiredoxin. | Thioredoxin reductase. | 0.483 |
SRX1 | trxB-5 | A0A4D9B8S3 | A0A4D9BM19 | Sulfiredoxin. | Thioredoxin reductase. | 0.483 |
Saspl_008543 | Saspl_022468 | A0A4D9B6V5 | A0A4D9C7X0 | Uncharacterized protein. | Thioredoxin domain-containing protein. | 0.949 |
Saspl_008543 | trxB | A0A4D9B6V5 | A0A4D8XXV6 | Uncharacterized protein. | Thioredoxin reductase (NADPH). | 0.483 |
Saspl_008543 | trxB-2 | A0A4D9B6V5 | A0A4D8ZWF3 | Uncharacterized protein. | Thioredoxin reductase (NADPH). | 0.483 |
Saspl_008543 | trxB-3 | A0A4D9B6V5 | A0A4D9AEW7 | Uncharacterized protein. | Thioredoxin reductase. | 0.483 |
Saspl_008543 | trxB-5 | A0A4D9B6V5 | A0A4D9BM19 | Uncharacterized protein. | Thioredoxin reductase. | 0.483 |
Saspl_022468 | SRX1 | A0A4D9C7X0 | A0A4D9B8S3 | Thioredoxin domain-containing protein. | Sulfiredoxin. | 0.949 |
Saspl_022468 | Saspl_008543 | A0A4D9C7X0 | A0A4D9B6V5 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.949 |
Saspl_022468 | Saspl_029235 | A0A4D9C7X0 | A0A4D8ZTY7 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.949 |
Saspl_022468 | Saspl_033506 | A0A4D9C7X0 | A0A4D8ZBB4 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.949 |
Saspl_022468 | Saspl_040022 | A0A4D9C7X0 | A0A4D8YW74 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.949 |
Saspl_022468 | Saspl_040023 | A0A4D9C7X0 | A0A4D8YNE6 | Thioredoxin domain-containing protein. | Uncharacterized protein. | 0.949 |
Saspl_022468 | trxB | A0A4D9C7X0 | A0A4D8XXV6 | Thioredoxin domain-containing protein. | Thioredoxin reductase (NADPH). | 0.995 |
Saspl_022468 | trxB-2 | A0A4D9C7X0 | A0A4D8ZWF3 | Thioredoxin domain-containing protein. | Thioredoxin reductase (NADPH). | 0.995 |
Saspl_022468 | trxB-3 | A0A4D9C7X0 | A0A4D9AEW7 | Thioredoxin domain-containing protein. | Thioredoxin reductase. | 0.995 |
Saspl_022468 | trxB-5 | A0A4D9C7X0 | A0A4D9BM19 | Thioredoxin domain-containing protein. | Thioredoxin reductase. | 0.995 |
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