STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086705_01251Unannotated protein. (553 aa)    
Predicted Functional Partners:
GCA_900086705_00421
Unannotated protein.
  
 
 0.828
GCA_900086705_01250
Unannotated protein.
       0.705
GCA_900086705_00372
Unannotated protein.
  
    0.685
GCA_900086705_00631
Unannotated protein.
  
    0.685
GCA_900086705_01998
Unannotated protein.
    
 0.645
GCA_900086705_01679
Unannotated protein.
 
  
 0.584
GCA_900086705_00502
Unannotated protein.
 
  
 0.557
GCA_900086705_02960
Unannotated protein.
   
 
 0.534
GCA_900086705_03295
Unannotated protein.
   
 
 0.515
GCA_900086705_03273
Unannotated protein.
  
  
 0.483
Your Current Organism:
Massilibacillus massiliensis
NCBI taxonomy Id: 1806837
Other names: CSUR P2411, Clostridiales bacterium Marseille-P2411, DSM 102838, M. massiliensis, strain Marseille-P2411
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.