STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086705_02033Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_900086705_03584
Unannotated protein.
  
 
 0.912
GCA_900086705_02029
Unannotated protein.
 
     0.737
GCA_900086705_02032
Unannotated protein.
 
  
 0.722
GCA_900086705_02030
Unannotated protein.
 
     0.717
GCA_900086705_02031
Unannotated protein.
 
     0.676
GCA_900086705_03524
Unannotated protein.
  
 
 0.608
GCA_900086705_03614
Unannotated protein.
    
 0.582
GCA_900086705_00991
Unannotated protein.
    
 0.579
GCA_900086705_00053
Unannotated protein.
    
  0.574
GCA_900086705_02074
Unannotated protein.
  
 
 0.537
Your Current Organism:
Massilibacillus massiliensis
NCBI taxonomy Id: 1806837
Other names: CSUR P2411, Clostridiales bacterium Marseille-P2411, DSM 102838, M. massiliensis, strain Marseille-P2411
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.