STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086705_03014Unannotated protein. (700 aa)    
Predicted Functional Partners:
GCA_900086705_01848
Unannotated protein.
   
 0.940
GCA_900086705_02691
Unannotated protein.
   
 0.940
GCA_900086705_02960
Unannotated protein.
  
 0.792
GCA_900086705_00753
Unannotated protein.
    
  0.770
GCA_900086705_01867
Unannotated protein.
  
 0.621
GCA_900086705_00133
Unannotated protein.
   
  0.598
GCA_900086705_00910
Unannotated protein.
  
 0.592
GCA_900086705_03221
Unannotated protein.
  
 0.590
GCA_900086705_01497
Unannotated protein.
     
 0.573
GCA_900086705_01137
Unannotated protein.
  
  
 0.558
Your Current Organism:
Massilibacillus massiliensis
NCBI taxonomy Id: 1806837
Other names: CSUR P2411, Clostridiales bacterium Marseille-P2411, DSM 102838, M. massiliensis, strain Marseille-P2411
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.