STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507BW70Methionine---tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (585 aa)    
Predicted Functional Partners:
A0A507BVY8
Tyrosine--tRNA ligase.
 
 0.909
A0A507C211
Leucine---tRNA ligase.
  
 0.901
SMI168
Leucine---tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.901
SMI245
Arginine---tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.896
A0A507CBF8
Isoleucine---tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.886
A0A507CE31
Uncharacterized protein.
 
  
 0.875
A0A507C1Q7
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.857
AIM10-2
Proline---tRNA ligase.
  
 0.853
AIM10
Proline---tRNA ligase.
  
 0.839
A0A507C7I2
Lysine--tRNA ligase.
  
 0.830
Your Current Organism:
Synchytrium microbalum
NCBI taxonomy Id: 1806994
Other names: JEL517, S. microbalum, Synchytrium microbalum Longcore, D.R. Simmons & Letcher, 2016, Synchytrium sp. JEL517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.