STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507BZ87UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (253 aa)    
Predicted Functional Partners:
A0A507C396
HECT domain-containing protein.
   
 0.996
A0A507C009
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
   
 0.937
A0A507C971
Ubiquitin-like domain-containing protein.
    
 0.930
A0A507BSV0
RING-type domain-containing protein.
    
 0.927
A0A507C4Y6
OTU domain-containing protein.
    
 0.911
A0A507BXN2
Uncharacterized protein.
    
 0.901
A0A507C6J6
RING-type domain-containing protein.
    
 0.895
A0A507C0W6
Uncharacterized protein.
   
 0.865
A0A507C568
Uncharacterized protein.
   
 0.865
A0A507BUS1
Ubiquitin-like domain-containing protein.
   
 0.859
Your Current Organism:
Synchytrium microbalum
NCBI taxonomy Id: 1806994
Other names: JEL517, S. microbalum, Synchytrium microbalum Longcore, D.R. Simmons & Letcher, 2016, Synchytrium sp. JEL517
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