STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507BZK4Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (965 aa)    
Predicted Functional Partners:
A0A507C368
Protein kinase domain-containing protein.
   
 0.997
A0A507C7W7
Uncharacterized protein.
    
 0.984
A0A507CDL9
Lipase_3 domain-containing protein.
   
 
 0.952
A0A507BTD6
Protein kinase domain-containing protein.
   
 0.951
A0A507CCB5
Protein kinase domain-containing protein.
   
 0.951
A0A507CFF9
Uncharacterized protein.
    
 
 0.936
A0A507BW60
F-box domain-containing protein.
    
 0.898
A0A507C1V0
Uncharacterized protein.
  
 0.827
A0A507C5T0
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.808
A0A507C8V2
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.808
Your Current Organism:
Synchytrium microbalum
NCBI taxonomy Id: 1806994
Other names: JEL517, S. microbalum, Synchytrium microbalum Longcore, D.R. Simmons & Letcher, 2016, Synchytrium sp. JEL517
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