STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507C4N2Uncharacterized protein. (320 aa)    
Predicted Functional Partners:
A0A507CAY0
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.999
A0A507CJA6
Uncharacterized protein.
    
 0.809
IDI1
Isopentenyl-diphosphate Delta-isomerase.
  
 
 0.808
MVD1
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
   
 0.802
A0A507C287
Uncharacterized protein.
     
 0.800
A0A507C3R8
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.798
A0A507BYN0
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.791
A0A507C457
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.791
A0A507CDX1
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.791
ERG9
Squalene synthase.
     
 0.751
Your Current Organism:
Synchytrium microbalum
NCBI taxonomy Id: 1806994
Other names: JEL517, S. microbalum, Synchytrium microbalum Longcore, D.R. Simmons & Letcher, 2016, Synchytrium sp. JEL517
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