STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507C903Uncharacterized protein. (782 aa)    
Predicted Functional Partners:
A0A507C5D0
Uncharacterized protein.
   
 0.997
A0A507CB44
Uncharacterized protein.
    
 0.987
A0A507C3Q9
t-SNARE coiled-coil homology domain-containing protein.
    
 0.981
A0A507CGU4
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.980
A0A507BYY7
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.920
A0A507C8M5
Uncharacterized protein.
   
 0.898
A0A507CGF2
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.857
A0A507C6F9
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.850
A0A507C3S4
SEC7 domain-containing protein.
   
 0.838
A0A507BYA8
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.837
Your Current Organism:
Synchytrium microbalum
NCBI taxonomy Id: 1806994
Other names: JEL517, S. microbalum, Synchytrium microbalum Longcore, D.R. Simmons & Letcher, 2016, Synchytrium sp. JEL517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.