STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507CBV2Uncharacterized protein. (588 aa)    
Predicted Functional Partners:
A0A507BYD8
Spindle pole body component.
    
 0.814
A0A507C1W3
Uncharacterized protein.
    
 0.764
A0A507C5X1
Spindle pole body component.
    
 0.764
A0A507C0T2
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.732
A0A507C687
Spindle pole body component.
    
 0.730
A0A507C1I6
Uncharacterized protein.
    
 0.697
A0A507C5Y0
Uncharacterized protein.
   
 
 0.594
A0A507CIU0
Uncharacterized protein.
   
   0.583
A0A507BS84
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.558
A0A507CG52
Uncharacterized protein.
    
 0.547
Your Current Organism:
Synchytrium microbalum
NCBI taxonomy Id: 1806994
Other names: JEL517, S. microbalum, Synchytrium microbalum Longcore, D.R. Simmons & Letcher, 2016, Synchytrium sp. JEL517
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