STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507CH61Ubiquitin-like domain-containing protein. (223 aa)    
Predicted Functional Partners:
A0A507C4H0
Uncharacterized protein.
    
 
 0.991
A0A507CDX3
Uncharacterized protein.
    
  0.989
A0A507CHP2
Uncharacterized protein.
    
  0.989
A0A507C0W3
JmjC domain-containing protein.
    
 0.957
A0A507BXV4
VWFA domain-containing protein.
   
 0.947
A0A507C396
HECT domain-containing protein.
    
 0.920
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.914
A0A507C910
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.893
A0A507CHX5
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.893
A0A507BTC9
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.891
Your Current Organism:
Synchytrium microbalum
NCBI taxonomy Id: 1806994
Other names: JEL517, S. microbalum, Synchytrium microbalum Longcore, D.R. Simmons & Letcher, 2016, Synchytrium sp. JEL517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.