STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgC_4Acyl-CoA dehydrogenase. (104 aa)    
Predicted Functional Partners:
mmgC_11
Acyl-CoA dehydrogenase.
 
     0.918
etfA
Electron transfer flavoprotein subunit alpha.
 
   0.842
etfB
Electron transfer flavoprotein subunit beta.
 
   0.831
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.742
KMO82074.1
Hypothetical protein.
 
  
 0.732
KMO76106.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.700
KMO76107.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.698
lgrD_1
Linear gramicidin synthase subunit D.
  
 
 0.667
eryA
Erythronolide synthase, modules 1 and 2.
  
 0.652
acdA_6
Acyl-CoA dehydrogenase.
  
     0.595
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.