Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMO74558.1 | folE | MOBUDSM44075_03496 | MOBUDSM44075_00369 | Putative GTP cyclohydrolase 1 type 2; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | GTP cyclohydrolase 1. | 0.854 |
KMO74558.1 | ribBA_1 | MOBUDSM44075_03496 | MOBUDSM44075_00728 | Putative GTP cyclohydrolase 1 type 2; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.896 |
KMO74558.1 | sulD | MOBUDSM44075_03496 | MOBUDSM44075_00366 | Putative GTP cyclohydrolase 1 type 2; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. | Bifunctional folate synthesis protein. | 0.811 |
KMO81798.1 | coaX | MOBUDSM44075_00365 | MOBUDSM44075_00361 | Hypothetical protein. | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.699 |
KMO81798.1 | folB | MOBUDSM44075_00365 | MOBUDSM44075_00367 | Hypothetical protein. | Putative dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.883 |
KMO81798.1 | folE | MOBUDSM44075_00365 | MOBUDSM44075_00369 | Hypothetical protein. | GTP cyclohydrolase 1. | 0.885 |
KMO81798.1 | folP1 | MOBUDSM44075_00365 | MOBUDSM44075_00368 | Hypothetical protein. | Dihydropteroate synthase 1. | 0.883 |
KMO81798.1 | ftsH_1 | MOBUDSM44075_00365 | MOBUDSM44075_00370 | Hypothetical protein. | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.800 |
KMO81798.1 | sulD | MOBUDSM44075_00365 | MOBUDSM44075_00366 | Hypothetical protein. | Bifunctional folate synthesis protein. | 0.893 |
coaX | KMO81798.1 | MOBUDSM44075_00361 | MOBUDSM44075_00365 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Hypothetical protein. | 0.699 |
coaX | folB | MOBUDSM44075_00361 | MOBUDSM44075_00367 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Putative dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.696 |
coaX | folE | MOBUDSM44075_00361 | MOBUDSM44075_00369 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | GTP cyclohydrolase 1. | 0.696 |
coaX | folP1 | MOBUDSM44075_00361 | MOBUDSM44075_00368 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Dihydropteroate synthase 1. | 0.734 |
coaX | ftsH_1 | MOBUDSM44075_00361 | MOBUDSM44075_00370 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.698 |
coaX | sulD | MOBUDSM44075_00361 | MOBUDSM44075_00366 | Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Bifunctional folate synthesis protein. | 0.699 |
fgs | folB | MOBUDSM44075_01686 | MOBUDSM44075_00367 | Folylpolyglutamate synthase. | Putative dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.930 |
fgs | folE | MOBUDSM44075_01686 | MOBUDSM44075_00369 | Folylpolyglutamate synthase. | GTP cyclohydrolase 1. | 0.901 |
fgs | folP1 | MOBUDSM44075_01686 | MOBUDSM44075_00368 | Folylpolyglutamate synthase. | Dihydropteroate synthase 1. | 0.999 |
fgs | folP2 | MOBUDSM44075_01686 | MOBUDSM44075_00448 | Folylpolyglutamate synthase. | Inactive dihydropteroate synthase 2; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.991 |
fgs | ribBA_1 | MOBUDSM44075_01686 | MOBUDSM44075_00728 | Folylpolyglutamate synthase. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.489 |
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