STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuD_2Alkanesulfonate monooxygenase. (390 aa)    
Predicted Functional Partners:
ssuA_1
Putative aliphatic sulfonates-binding protein precursor.
 
 
  0.965
msuD_2
Methanesulfonate monooxygenase.
  
  
 
0.920
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
  
 
  0.911
sir
Sulfite reductase [ferredoxin]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.892
dmoA_1
Dimethyl-sulfide monooxygenase.
 
    0.814
KMO77824.1
Acetyltransferase (GNAT) family protein.
       0.757
ssuD_3
Alkanesulfonate monooxygenase.
  
  
 
0.752
msuD_1
Methanesulfonate monooxygenase.
  
  
 
0.747
soxC_2
Dibenzothiophene desulfurization enzyme C.
  
    0.716
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
  0.700
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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