STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcaF_3Beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)    
Predicted Functional Partners:
KMO76329.1
Hypothetical protein.
 
 0.999
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.995
fadB2
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.981
KMO75517.1
Hypothetical protein.
 
 0.954
KMO74684.1
acetyl-CoA acetyltransferase.
 
 0.952
KMO77806.1
Hypothetical protein; Acyl-CoA dehydrogenase, C-terminal domain.
  
 
  0.936
pcaF_2
Beta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.919
KMO79896.1
acetyl-CoA acetyltransferase.
  
  
  0.918
KMO81656.1
acetyl-CoA acetyltransferase.
  
  
 
0.915
fadA_1
Putative acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.914
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.