Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
lgrD_1 | metH | MOBUDSM44075_00268 | MOBUDSM44075_01486 | Linear gramicidin synthase subunit D. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.882 |
lgrD_1 | rutD_2 | MOBUDSM44075_00268 | MOBUDSM44075_02388 | Linear gramicidin synthase subunit D. | Putative aminoacrylate hydrolase RutD. | 0.822 |
lgrD_1 | sotB_2 | MOBUDSM44075_00268 | MOBUDSM44075_02387 | Linear gramicidin synthase subunit D. | Sugar efflux transporter. | 0.400 |
metH | lgrD_1 | MOBUDSM44075_01486 | MOBUDSM44075_00268 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Linear gramicidin synthase subunit D. | 0.882 |
metH | sotB_2 | MOBUDSM44075_01486 | MOBUDSM44075_02387 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Sugar efflux transporter. | 0.410 |
rutD_2 | lgrD_1 | MOBUDSM44075_02388 | MOBUDSM44075_00268 | Putative aminoacrylate hydrolase RutD. | Linear gramicidin synthase subunit D. | 0.822 |
rutD_2 | sotB_2 | MOBUDSM44075_02388 | MOBUDSM44075_02387 | Putative aminoacrylate hydrolase RutD. | Sugar efflux transporter. | 0.774 |
rutD_2 | zntR | MOBUDSM44075_02388 | MOBUDSM44075_02389 | Putative aminoacrylate hydrolase RutD. | HTH-type transcriptional regulator ZntR. | 0.607 |
sotB_2 | lgrD_1 | MOBUDSM44075_02387 | MOBUDSM44075_00268 | Sugar efflux transporter. | Linear gramicidin synthase subunit D. | 0.400 |
sotB_2 | metH | MOBUDSM44075_02387 | MOBUDSM44075_01486 | Sugar efflux transporter. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.410 |
sotB_2 | rutD_2 | MOBUDSM44075_02387 | MOBUDSM44075_02388 | Sugar efflux transporter. | Putative aminoacrylate hydrolase RutD. | 0.774 |
sotB_2 | yycB_1 | MOBUDSM44075_02387 | MOBUDSM44075_04292 | Sugar efflux transporter. | Putative transporter YycB. | 0.571 |
sotB_2 | yycB_2 | MOBUDSM44075_02387 | MOBUDSM44075_05016 | Sugar efflux transporter. | Putative transporter YycB. | 0.531 |
sotB_2 | zntR | MOBUDSM44075_02387 | MOBUDSM44075_02389 | Sugar efflux transporter. | HTH-type transcriptional regulator ZntR. | 0.564 |
yycB_1 | sotB_2 | MOBUDSM44075_04292 | MOBUDSM44075_02387 | Putative transporter YycB. | Sugar efflux transporter. | 0.571 |
yycB_2 | sotB_2 | MOBUDSM44075_05016 | MOBUDSM44075_02387 | Putative transporter YycB. | Sugar efflux transporter. | 0.531 |
zntR | rutD_2 | MOBUDSM44075_02389 | MOBUDSM44075_02388 | HTH-type transcriptional regulator ZntR. | Putative aminoacrylate hydrolase RutD. | 0.607 |
zntR | sotB_2 | MOBUDSM44075_02389 | MOBUDSM44075_02387 | HTH-type transcriptional regulator ZntR. | Sugar efflux transporter. | 0.564 |